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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831439.1_cds_XP_016504523.1_17958
CDS Infomation

[gene=LOC107822485] [db_xref=GeneID:107822485] [protein=low-temperature-induced cysteine proteinase-like isoform X2] [protein_id=XP_016504523.1] [location=join(15316..15604,16313..16548,16643..16780,16892..17389,17926..18069)] [gbkey=CDS]
Sequence

ATGAGATTGGAGAAGTTCAGAAGGAATGTGAAGTATATAGTAGAAAAGAACTCAAAGAGG
AAGTCAGATTCAGACCATTTGGTTGGTTTGACCAACTTTGCCGATATGAGCAATGAAGAA
TTCAGGCAAGTTCATACTTCAAAGATTAAGATACCATTTGACAAGAGAAAGACTATTCAG
ATGAAGAATGCGGAAAAAAAACCAACTCCAGTTTATTGTGATGCTCCTCCTTCAAGGGAT
TGGAGGAAATATGGGGCTGTCACTGAGGTCAAGGACCAACACCTCTGCGGAGCTTGCTGG
GCATTTTCAGCATGTGGAGCGATGGAGGGAATAAATGCAATAGTTACTGGTGAACTTATT
AGCCTTTCTGTCCAACAACTTATCGATTGTGATAATTCCACCAATTTGGGCTGTTACGGT
GGATATATGGACCCTGCTTTTGAATGGGTGATGAACAATGGTGGCATTGATTCAGATTCT
GATTATCCATACACTGTCTCTCAAGGCGCATGCAATATCACCAAGGTGAACCAAAAGGTT
GTAACAATTGATGGATACCGAGATGTTCCACAGGAGGAAAGTGCCCTTCTTTGTGCTGTT
GCTCAACAGCCTGTTAGTGTGGGCATCGATGGAGCGAGTGCTGATTTTCAATTATACAGA
GGGGGAATCTACGATGGAAGTTGCTCTAGTAATCCAGATGACTTAAGCCATGGAGTATTA
ATAGTAGGATATGGTTCTGCAGGAGATGATGACTATTGGATTATCAAGAACTCATGGGGT
ACATCATGGGGAATGGAGGGGTATGGATATATAAGAAGAAACACTGATTTGCCTTATGGT
GTTTGTGCCATTAATTCATTGGCTTCATATCCAACGAAGGAACTGGCTTCTGCACCATCT
CCTTATCCATCTCCAGCCGTTCCACCACCTCCCTCGCCATCCCCTCCACCTCCTCAACCG
CCTTCTCCAAAACCAAGTGAATGTGGAAACTTGTATTATTGTCCAGAAGATCAAACATGC
TGCTGTGAGTTGGAGTTCTTTGGAATTTGCGTCATTCAAAGCTGCTGTCCTCACAAAAAT
GGTGTTTGTTGTGATGGATCAGAATTCTGCTGCCCAACTGAATATCCCATTTGTGATGTT
TATGAAGGCCTCTGCCTCAAGAGGGTTAGAGACACTCTGGGAGTGGCAGCAAAGAAGAGA
AGAATGGCCAAATACAAGTTACCATGGAGTACAAGCACTAAAGAAACAGAGGAGTTGGAC
CAAACACTGAAATGGAAGAGGAATCATGTCGCGCCAGTGCTCTGA

Peptide Sequence

PEP ID

XP_016504523.1
PEP Infomation

PREDICTED: low-temperature-induced cysteine proteinase-like isoform X2 [Nicotiana tabacum]
Sequence

MRLEKFRRNVKYIVEKNSKRKSDSDHLVGLTNFADMSNEEFRQVHTSKIKIPFDKRKTIQ
MKNAEKKPTPVYCDAPPSRDWRKYGAVTEVKDQHLCGACWAFSACGAMEGINAIVTGELI
SLSVQQLIDCDNSTNLGCYGGYMDPAFEWVMNNGGIDSDSDYPYTVSQGACNITKVNQKV
VTIDGYRDVPQEESALLCAVAQQPVSVGIDGASADFQLYRGGIYDGSCSSNPDDLSHGVL
IVGYGSAGDDDYWIIKNSWGTSWGMEGYGYIRRNTDLPYGVCAINSLASYPTKELASAPS
PYPSPAVPPPPSPSPPPPQPPSPKPSECGNLYYCPEDQTCCCELEFFGICVIQSCCPHKN
GVCCDGSEFCCPTEYPICDVYEGLCLKRVRDTLGVAAKKRRMAKYKLPWSTSTKETEELD
QTLKWKRNHVAPVL

Transcript Sequence

Gene sequence data has not been registered.